BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022E10LP1|AL427917
(1109 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig895 1076 0.0
3x_Contig541 451 e-126
>3x_Contig895
Length = 3157
Score = 1076 bits (542), Expect = 0.0
Identities = 542/542 (100%)
Strand = Plus / Minus
Query: 1 gatcatcattgcagtggataagttctcttgttccggcaatttataaaatggatttttcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gatcatcattgcagtggataagttctcttgttccggcaatttataaaatggatttttcgg 669
Query: 61 agtcaatttaatgatttcccctacgggtaccggatgtcccaattggcactgtcttgttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 agtcaatttaatgatttcccctacgggtaccggatgtcccaattggcactgtcttgttac 609
Query: 121 ttccgggttattaacggtaatcttattgagcactaacaacaaatacgagttcaaatcgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttccgggttattaacggtaatcttattgagcactaacaacaaatacgagttcaaatcgtt 549
Query: 181 ataatcaaaagttaaacagtcgatatcatcaggagagttttccacaggtaaagacgtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ataatcaaaagttaaacagtcgatatcatcaggagagttttccacaggtaaagacgtcaa 489
Query: 241 attgtatttcaccaacgtgttaaaggcttcctccacggaaatagaaccatcaataaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 attgtatttcaccaacgtgttaaaggcttcctccacggaaatagaaccatcaataaaaat 429
Query: 301 caatttgttctgttcgaccaactgcgacaatgggatcagttgccacttcgtagtgtggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 caatttgttctgttcgaccaactgcgacaatgggatcagttgccacttcgtagtgtggat 369
Query: 361 tctggacaattgagtgtcgaacgacgattcagagtttgttcttgacactgaatgcgaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tctggacaattgagtgtcgaacgacgattcagagtttgttcttgacactgaatgcgaatg 309
Query: 421 tagcgtatctactgctgatagagatggagatattggaacatctgaattgggaccaggaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tagcgtatctactgctgatagagatggagatattggaacatctgaattgggaccaggaac 249
Query: 481 gtaaccagaaccggtaccactgccagtacgttcgagcggacaatgcatgctggtcgtgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gtaaccagaaccggtaccactgccagtacgttcgagcggacaatgcatgctggtcgtgct 189
Query: 541 ag 542
||
Sbjct: 188 ag 187
>3x_Contig541
Length = 1792
Score = 451 bits (227), Expect = e-126
Identities = 295/307 (96%), Gaps = 9/307 (2%)
Strand = Plus / Minus
Query: 808 cacgatagaaacatgtctgctgctagaagcactagaacctgaagactgca-tggtaaaa- 865
||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 1703 cacgatagaaacatg-ctgctgc-agaagcactagaacctgaagactgcactggtaaaac 1646
Query: 866 tatg-ttgg-tcgacaaaacaagttactactatctttttttcctcaggtgaatcgtaaga 923
|||| |||| |||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 1645 tatgcttggatcgacaaaacaagt-actactatctttttt-cctcaggtgaatcgtaaga 1588
Query: 924 agttgctgagaaattactactagaattgctacttcccttgtaaacagttaag-actagac 982
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1587 agttgctgagaaattactactagaattgctacttcccttgtaaacagttaagcactagac 1528
Query: 983 taccttattagacatagttttaattattggrtttaatttcttaacttaaaaaagccttat 1042
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 1527 taccttattagacatagttttaattattggatttaatttcttaacttaaaaaagctttat 1468
Query: 1043 tcattttttttttacctctaatacatgctggacccggcaatcacmcatcgcatttcactg 1102
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1467 tcattttttttttacctctaatacatgctggacccggcaatcacacatcgcatttcactg 1408
Query: 1103 actactc 1109
|||||||
Sbjct: 1407 actactc 1401
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8955
Number of Sequences: 1807
Number of extensions: 8955
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 2
length of query: 1109
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1093
effective length of database: 10,329,639
effective search space: 11290295427
effective search space used: 11290295427
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.8 bits)